Nutrient cycling in waste streams, including municipal wastewater and food waste, is critical to the prevention of eutrophication in receiving water bodies and to the recovery of nutrients for downstream applications. We have utilized next-generation sequencing and bioinformatics pipelines to interrogate microbial communities involved in biological nutrient removal and recovery, namely the cycling of nitrogen, carbon, and phosphorus. In my dissertation, I used metagenomics to expand the model for acidogenesis and acetogenesis from food waste. I also studied biological nitrogen removal in full-scale wastewater treatment processes using metagenomics and metatranscriptomics. Additionally, I was able to show the applicability of novel nitrogen removal pathways to mainstream sewage treatment at reduced energy and chemical costs. My work included partnerships with multiple domestic and international municipal wastewater treatment utilities and the US EPA.
Nutrient Cycling in Waste Streams
Publications
Time to act-assessing variations in qPCR analyses in biological nitrogen removal with examples from partial nitritation/anammox systems
Highlights: (1) Assessment of variation in qPCR analysis of biological nitrogen removal microbiome. (2) Comparison of qPCR results …
Metatranscriptomic investigation of adaptation in NO and N2O production from a lab-scale nitrification process upon repeated exposure to anoxic–aerobic cycling
This study identified underlying metabolic processes and mechanisms contributing to NO and N2O production in a lab-scale BNR process
Structural and functional interrogation of selected biological nitrogen removal systems in the United States, Denmark, and Singapore using shotgun metagenomics
Metagenomics revealed that inoculation and operating conditions of engineered bioprocesses shape the resident microbial structure and …
Comammox functionality identified in diverse engineered biological wastewater treatment
A metagenomic survey was conducted to quantify contributions of comammox bacteria to overall nitrogen cycling in BNR processes.